In the package, we use our RMAD method in order to estimate the noise variance.ĭescription: This package also includes the Prefiltered Rotationally Invariant NonLocal Means filter. This filter requires the estimation of the noise variance to be fully automatic. A Rician-adapted version has been proposed in order to handle the intensity bias introduced by Rician noise. This filter obtained really good results and is the fastest proposed methods. Without partial Fourier (non correlated noise).ĭescription: This package also includes the Oracle-based DCT filter. In the package, we use our RMAD method in order to estimate the noise variance. Based on a similar approach than ONLM, this filter is more efficient on very low SNR image compared to ONLM. In case of SENSE or GRAPPA acquisition, we suggest to use LPCA or AONLM.ĭescription: This package includes the Multi-resolution Optimized Nonlocal Means (ONLM). In case of zero-padding in k-space or partial Fourier acquisition, the noise variance case be under-estimated, we suggest to use increase smoothing parameter or to use LPCA or AONLM which may be more robust to correlated noise. In this case, the Rician option should be activated.
#Super denoising for windows software
The ONLM filter is included in several software such as MedINRIA and Minctool. A Rician-adapted version (ORNLM) has been proposed in to handle the intensity bias introduced by Rician noise. The impact of this filter on segmentation or cortical surface extraction has been investigated (see here for details). This filter is currently the state-of-the-art for 3D MRI denoising and has been well-validated. Other filters: ONLM, ONLM multiresolution, ODCT, PRINLMĭescription: This package includes the Optimized Nonlocal Means (ONLM). Only the intensity bias correction will not be achieved. However, by using Gaussian noise model (i.e., non-activation of Rician option) good results can be obtained. Finally, for GRAPPA reconstruction no adapted methods are proposed in this package. AONLM filter can be used with Gaussian model. In practice, AONLM will be more robust than ONLM face of partial Fourier. This filter obtained good results in many clinical setups especially on SENSE without partial Fourier. Utilization: This filter is theoretically dedicated to MRI acquired with This filter was included in the method which won the ISBI 2013 HARDI and DTI challenges. By using integrated noise estimation, this filter is fully automatic and quiet robust. This filter has been designed for spatially varying noise typically presents in parallel imaging.
Only the intensity bias correction will not be achieved.ĭescription: The second denoising filter proposed in the package is the Adaptive Optimized Nonlocal Means (AONLM). LPCA filter can be used with Gaussian model. In practice, LPCA will be more robust than other filter face of partial Fourier. Without partial Fourier (non correlated noise) SENSE reconstruction (SENSE results in Rican noise, GRAPPA results in non-central Chi noise) Utilization: This filter is theoretically dedicated to DWI acquired with It is the only proposed filter taking into account the 4D nature of DWI dataset. Description: The most efficient denoising filter proposed in the package for DWI is the Local PCA.
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